Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

Alm, Erik; Broberg, Eeva K; Connor, Thomas; Hodcroft, Emma B; Komissarov, Andrey B; Maurer-Stroh, Sebastian; Melidou, Angeliki; Neher, Richard A; O’Toole, Áine; Pereyaslov, Dmitriy; The WHO European Region sequencing laboratories and GISAID EpiCoV group (Niko Beerenwinkel,; Posada-Céspedes, Susana; Philipp, Kim; Jablonski,; Pedro Falé Ferreira,; Topolsky, Ivan; Avšičžupanc, Tatjana; Korva, Miša; Poljak, Mario; Zakotnik, Samo; Tomaž,; Zorec, Mark; Bragstad, Karoline; Hungnes, Olav; Stene-Johansen, Kathrine; Reusken, Chantal; Meijer, Adam; Vennema, Harry; Ruiz-Roldán, Lidia; María Alma Bracho,; García-González, Neris; Chiner-Oms, Álvaro; Cancino-Muñoz, Irving; Comas, Iñaki; Galo, A Goig; Torres-Puente, Manuela; Mariana, G López; Martínez-Priego, Llúcia; D’Auria, Giuseppe; LoretoFerrús-Abad,; Griselda De Marco,; Galan-Vendrell, Inmaculada; Carbó-Ramirez, Sandra; Ruíz-Hueso, Paula; Coscollá, Mireia; Polackova, Katerina; Kramna, Lenka; Cinek, Ondrej; Richter, Jan; Krashias, George; Tryfonos, Christina; Bashiardes, Stavros; Koptides, Dana; Christodoulou, Christina; Bartolini, Barbara; Cesare Em Gruber,; Antonino Di Caro,; Castilletti, Concetta; Stefani, Fabrizio; Sara Giordana Rimoldi,; Romeri, Francesca; Salerno, Franco; Polesello, Stefano; Nagy, Alexander; Jirincova, Helena; Vecerova, Jaromira; Novakova, Ludmila; Cordey, Samuel; Murtskhvaladze, Marine; Kotaria, Nato; Schär, Tobias; Beisel, Christian; Vugrek, Oliver; Rokić, Filip; Trgovecgreif, Lovro; Jurak, Igor; Rukavina, Tomislav; Sučić, Neven; Schønning, Kristian; Søren, M Karst; Rasmus, H Kirkegaard; Thomas, Y Michaelsen; Emil Aa Sørensen,; Knutson, Simon; Brandt, Jakob; Le-Quy, Vang; Sørensen, Trine; Petersen, Celine; Martin Schou Pedersen,; Sanne Løkkegaard Larsen,; Marianne Nielsine Skov,; Rasmussen, Morten; Fonager, Jannik; Fomsgaard, Anders; Rinat Amirovich Maksyutov,; Elena Vasil’Evna Gavrilova,; Oleg Victorovich Pyankov,; Sergey Alexandrovich Bodnev,; Tatyana Vladimirovna Tregubchak,; Alexander Nikolayevich Shvalov,; Denis Victorovich Antonets,; Paola Cristina Resende,; Goya, Stephanie; Perrin, Amandine; Raphael Tc Lee,; Yadahalli, Shilpa; Alvin, X Han; Colin, A Russell; Schmutz, Stefan; Zaheri, Maryam; Kufner, Verena; Huber, Michael; Trkola, Alexandra; Antwerpen, Markus; Mathias, C Walter; Sylvie Van Der Werf,; Gambaro, Fabiana; Behillil, Sylvie; Enouf, Vincent; Donati, Flora; Ustinova, Monta; Rovite, Vita; Klovins, Janis; Savicka, Oksana; Anke, K Wienecke-Baldacchino; Ragimbeau, Catherine; Fournier, Guillaume; Mossong, Joël; Stephan, W Aberle; Haukland, Mattias; Enkirch, Theresa; Advani, Abdolreza; Maria Lind Karlberg,; Oskar Karlsson Lindsjö,; Broddesson, Sandra; Sláviková, Monika; Ličková, Martina; Klempa, Boris; Staroňová, Edita; Tichá, Elena; Szemes, Tomáš; Rusňáková, Diana; Stadler, Tanja; Quer, Josep; Anton, Andres; Andres, Cristina; Piñana, Maria; Garcia-Cehic, Damir; Pumarola, Tomas; Izopet, Jacques; Gioula, Georgia; Exindari, Maria; Papa, Anna; Chatzidimitriou, Dimitrios; Metallidis, Symeon; Pappa, Stella; Milan Macek Jr,; Geryk, Jan; Brož, Petr; Briksí, Aleš; Hubáček, Petr; Dřevínek, Pavel; Zajac, Miroslav; Kvapil, Petr; Holub, Michal; Kvapilová, Kateřina; Novotný, Adam; Kašný, Martin; Klempt, Petr; Vapalahti, Olli; Smura, Teemu; Sironen, Tarja; Selhorst, Philippe; Anthony, Colin; Ariën, Kevin; Simon-Loriere, Etienne; Rabalski, Lukasz; Bienkowska-Szewczyk, Krystyna; Borges, Vítor; Isidro, Joana; João Paulo Gomes,; Guiomar, Raquel; Pechirra, Pedro; Costa, Inês; Duarte, Sílvia; Vieira, Luís; Pyrc, Krzysztof; Neta, S Zuckerman; Turdikulova, Shahlo; Abdullaev, Alisher; Dalimova, Dilbar; Abdurakhimov, Abror; Tagliabracci, Adriano; Alessandrini, Federica; Melchionda, Filomena; Onofri, Valerio; Turchi, Chiara; Bagnarelli, Patrizia; Menzo, Stefano; Caucci, Sara; Laura Di Sante,; Popa, Alexandra; Genger, Jakob-Wendelin; Agerer, Benedikt; Lercher, Alexander; Endler, Lukas; Smyth, Mark; Penz, Thomas; Schuster, Michael; Senekowitsch, Martin; Laine, Jan; Bock, Christoph; Bergthaler, Andreas; Shevtsov, Alexandr; Kalendar, Ruslan; Ramanculov, Yerlan; Graf, Alexander; Muenchhoff, Maximilian; Oliver, T Keppler; Krebs, Stefan; Blum, Helmut; Marcello, Alessandro; Licastro, Danilo; D’Agaro, Pierlanfranco; Laubscher, Florian; Vidanovic, Dejan; Tesovic, Bojana; Volkening, Jeremy; Clementi, Nicola; Mancini, Nicasio; Rupnik, Maja; Mahnic, Aleksander; Walker, Andreas; Houwaart, Torsten; Wienemann, Tobias; Malte Kohns Vasconcelos,; Strelow, Daniel; Björn-Erik Ole Jensen,; Senff, Tina; Hülse, Lisanna; Adams, Ortwin; Andree, Marcel; Hauka, Sandra; Feldt, Torsten; Keitel, Verena; Kindgen-Milles, Detlef; Timm, Jörg; Pfeffer, Klaus; Alexander, T Dilthey; Moore, Catherine; Ozdarendeli, Aykut; Shaikh Terkis Islam Pavel,; Yetiskin, Hazel; Aydin, Gunsu; Holyavkin, Can; Muhammet Ali Uygut,; Cevik, Ceren; Shchetinin, Alexey; Gushchin, Vladimir; Dinler-Doganay, Gizem; Doganay, Levent; Kizilboga-Akgun, Tugba; Karacan, Ilker; Pancer, Katarzyna; Maes, Piet; Martí-Carreras, Joan; Wawina-Bokalanga, Tony; Vanmechelen, Bert; Thürmer, Andrea; Wedde, Marianne; Dürrwald, Ralf; Max Von Kleist,; Drechsel, Oliver; Wolff, Thorsten; Fuchs, Stephan; Kmiecinski, Rene; Michel, Janine; Nitsche, Andreas; Casas, Inmaculada; María Iglesias Caballero,; Zaballos, Ángel; Jiménez, Pilar; Jiménez, Mercedes; Sara Monzón Fernández,; Sarai Varona Fernández,; Isabel Cuesta De La Plaza,; Fadeev, Artem; Ivanova, Anna; Sergeeva, Mariia; Stefanelli, Paola; M Estee Torok,; Hall, Grant; Ana Da Silva Filipe,; Turtle, Lance; Afifi, Safiah; Mccluggage, Kathryn; Beer, Robert; Ledesma, Juan; Maksimovic, Joshua; Spellman, Karla; William, L Hamilton; Marchbank, Angela; Joel Alexander Southgate,; Underwood, Anthony; Taylor, Ben; Yeats, Corin; Abudahab, Khalil; Matthew, R Gemmell; Eccles, Richard; Lucaci, Anita; Charlotte Abigail Nelson,; Rainbow, Lucille; Whitehead, Mark; Gregory, Richard; Haldenby, Sam; Paterson, Steve; Margaret, A Hughes; Martin, D Curran; Baker, David; Tucker, Rachel; Luke, R Green; Feltwell, Theresa; Fenella, D Halstead; Wyles, Matthew; Aminu, S Jahun; Shazaad S, Y Ahmad; Georgana, Iliana; Goodfellow, Ian; Yakovleva, Anna; Luke, W Meredith; Gavriil, Artemis; Ali Raza Awan,; Fisher, Chloe; Jonathan,

doi:10.2807/1560-7917.ES.2020.25.32.2001410

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 / Erik, A., Eeva K, B., Thomas, C., Emma B, H., Andrey B, K., Sebastian, M., Angeliki, M., Richard A, N., Áine, O., Dmitriy, P., WHO European Region sequencing laboratories and GISAID EpiCoV group (Niko Beerenwinkel, T., Posada-Céspedes, S., Philipp, K., Jablonski, ., Falé Ferreira, P., Topolsky, I., Avšičžupanc, T., Korva, M., Poljak, M., Zakotnik, S., et al.. - In: EUROSURVEILLANCE. - ISSN 1560-7917. - 25:32(2020), pp. 7-14. [10.2807/1560-7917.ES.2020.25.32.2001410]

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

Alm, Erik;Broberg, Eeva K;Connor, Thomas;Hodcroft, Emma B;Komissarov, Andrey B;Maurer-Stroh, Sebastian;Melidou, Angeliki;Neher, Richard A;O’Toole, Áine;Pereyaslov, Dmitriy;Susana Posada-Céspedes;Kim Philipp;Jablonski;Pedro Falé Ferreira;Ivan Topolsky;Tatjana AvšičŽupanc;Miša Korva;Mario Poljak;Samo Zakotnik;Tomaž;Mark Zorec;Karoline Bragstad;Olav Hungnes;Kathrine Stene-Johansen;Chantal Reusken;Adam Meijer;Harry Vennema;Lidia Ruiz-Roldán;María Alma Bracho;Neris García-González;Álvaro Chiner-Oms;Irving Cancino-Muñoz;Iñaki Comas;Galo A Goig;Manuela Torres-Puente;Mariana G López;Llúcia Martínez-Priego;Giuseppe D’Auria;LoretoFerrús-Abad;Griselda de Marco;Inmaculada Galan-Vendrell;Sandra Carbó-Ramirez;Paula Ruíz-Hueso;Mireia Coscollá;Katerina Polackova;Lenka Kramna;Ondrej Cinek;Jan Richter;George Krashias;Christina Tryfonos;Stavros Bashiardes;Dana Koptides;Christina Christodoulou;Barbara Bartolini;Cesare Em Gruber;Antonino Di Caro;Concetta Castilletti;Fabrizio Stefani;Sara Giordana Rimoldi;Francesca Romeri;Franco Salerno;Stefano Polesello;Alexander Nagy;Helena Jirincova;Jaromira Vecerova;Ludmila Novakova;Samuel Cordey;Marine Murtskhvaladze;Nato Kotaria;Tobias Schär;Christian Beisel;Oliver Vugrek;Filip Rokić;Lovro TrgovecGreif;Igor Jurak;Tomislav Rukavina;Neven Sučić;Kristian Schønning;Søren M Karst;Rasmus H Kirkegaard;Thomas Y Michaelsen;Emil Aa Sørensen;Simon Knutson;Jakob Brandt;Vang Le-Quy;Trine Sørensen;Celine Petersen;Martin Schou Pedersen;Sanne Løkkegaard Larsen;Marianne Nielsine Skov;Morten Rasmussen;Jannik Fonager;Anders Fomsgaard;Rinat Amirovich Maksyutov;Elena Vasil’Evna Gavrilova;Oleg Victorovich Pyankov;Sergey Alexandrovich Bodnev;Tatyana Vladimirovna Tregubchak;Alexander Nikolayevich Shvalov;Denis Victorovich Antonets;Paola Cristina Resende;Stephanie Goya;Amandine Perrin;Raphael Tc Lee;Shilpa Yadahalli;Alvin X Han;Colin A Russell;Stefan Schmutz;Maryam Zaheri;Verena Kufner;Michael Huber;Alexandra Trkola;Markus Antwerpen;Mathias C Walter;Sylvie van der Werf;Fabiana Gambaro;Sylvie Behillil;Vincent Enouf;Flora Donati;Monta Ustinova;Vita Rovite;Janis Klovins;Oksana Savicka;Anke K Wienecke-Baldacchino;Catherine Ragimbeau;Guillaume Fournier;Joël Mossong;Stephan W Aberle;Mattias Haukland;Theresa Enkirch;Abdolreza Advani;Maria Lind Karlberg;Oskar Karlsson Lindsjö;Sandra Broddesson;Monika Sláviková;Martina Ličková;Boris Klempa;Edita Staroňová;Elena Tichá;Tomáš Szemes;Diana Rusňáková;Tanja Stadler;Josep Quer;Andres Anton;Cristina Andres;Maria Piñana;Damir Garcia-Cehic;Tomas Pumarola;Jacques Izopet;Georgia Gioula;Maria Exindari;Anna Papa;Dimitrios Chatzidimitriou;Symeon Metallidis;Stella Pappa;Milan Macek Jr;Jan Geryk;Petr Brož;Aleš Briksí;Petr Hubáček;Pavel Dřevínek;Miroslav Zajac;Petr Kvapil;Michal Holub;Kateřina Kvapilová;Adam Novotný;Martin Kašný;Petr Klempt;Olli Vapalahti;Teemu Smura;Tarja Sironen;Philippe Selhorst;Colin Anthony;Kevin Ariën;Etienne Simon-Loriere;Lukasz Rabalski;Krystyna Bienkowska-Szewczyk;Vítor Borges;Joana Isidro;João Paulo Gomes;Raquel Guiomar;Pedro Pechirra;Inês Costa;Sílvia Duarte;Luís Vieira;Krzysztof Pyrc;Neta S Zuckerman;Shahlo Turdikulova;Alisher Abdullaev;Dilbar Dalimova;Abror Abdurakhimov;Adriano Tagliabracci;Federica Alessandrini;Filomena Melchionda;Valerio Onofri;Chiara Turchi;Patrizia Bagnarelli;Stefano Menzo;Sara Caucci;Laura Di Sante;Alexandra Popa;Jakob-Wendelin Genger;Benedikt Agerer;Alexander Lercher;Lukas Endler;Mark Smyth;Thomas Penz;Michael Schuster;Martin Senekowitsch;Jan Laine;Christoph Bock;Andreas Bergthaler;Alexandr Shevtsov;Ruslan Kalendar;Yerlan Ramanculov;Alexander Graf;Maximilian Muenchhoff;Oliver T Keppler;Stefan Krebs;Helmut Blum;Alessandro Marcello;Danilo Licastro;Pierlanfranco D’Agaro;Florian Laubscher;Dejan Vidanovic;Bojana Tesovic;Jeremy Volkening;Nicola Clementi;Nicasio Mancini;Maja Rupnik;Aleksander Mahnic;Andreas Walker;Torsten Houwaart;Tobias Wienemann;Malte Kohns Vasconcelos;Daniel Strelow;Björn-Erik Ole Jensen;Tina Senff;Lisanna Hülse;Ortwin Adams;Marcel Andree;Sandra Hauka;Torsten Feldt;Verena Keitel;Detlef Kindgen-Milles;Jörg Timm;Klaus Pfeffer;Alexander T Dilthey;Catherine Moore;Aykut Ozdarendeli;Shaikh Terkis Islam Pavel;Hazel Yetiskin;Gunsu Aydin;Can Holyavkin;Muhammet Ali Uygut;Ceren Cevik;Alexey Shchetinin;Vladimir Gushchin;Gizem Dinler-Doganay;Levent Doganay;Tugba Kizilboga-Akgun;Ilker Karacan;Katarzyna Pancer;Piet Maes;Joan Martí-Carreras;Tony Wawina-Bokalanga;Bert Vanmechelen;Andrea Thürmer;Marianne Wedde;Ralf Dürrwald;Max Von Kleist;Oliver Drechsel;Thorsten Wolff;Stephan Fuchs;Rene Kmiecinski;Janine Michel;Andreas Nitsche;Inmaculada Casas;María Iglesias Caballero;Ángel Zaballos;Pilar Jiménez;Mercedes Jiménez;Sara Monzón Fernández;Sarai Varona Fernández;Isabel Cuesta De La Plaza;Artem Fadeev;Anna Ivanova;Mariia Sergeeva;Paola Stefanelli;M Estee Torok;Grant Hall;Ana da Silva Filipe;Lance Turtle;Safiah Afifi;Kathryn Mccluggage;Robert Beer;Juan Ledesma;Joshua Maksimovic;Karla Spellman;William L Hamilton;Angela Marchbank;Joel Alexander Southgate;Anthony Underwood;Ben Taylor;Corin Yeats;Khalil Abudahab;Matthew R Gemmell;Richard Eccles;Anita Lucaci;Charlotte Abigail Nelson;Lucille Rainbow;Mark Whitehead;Richard Gregory;Sam Haldenby;Steve Paterson;Margaret A Hughes;Martin D Curran;David Baker;Rachel Tucker;Luke R Green;Theresa Feltwell;Fenella D Halstead;Matthew Wyles;Aminu S Jahun;Shazaad S Y Ahmad;Iliana Georgana;Ian Goodfellow;Anna Yakovleva;Luke W Meredith;Artemis Gavriil;Ali Raza Awan;Chloe Fisher;Jonathan

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Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

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